DOI: 10.18129/B9.bioc.CLLmethylation  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see CLLmethylation.

Methylation data of primary CLL samples in PACE project

Bioconductor version: 3.16

The package includes DNA methylation data for the primary Chronic Lymphocytic Leukemia samples included in the Primary Blood Cancer Encyclopedia (PACE) project. Raw data from the 450k DNA methylation arrays is stored in the European Genome-Phenome Archive (EGA) under accession number EGAS0000100174. For more information concerning the project please refer to the paper "Drug-perturbation-based stratification of blood cancer" by Dietrich S, Oles M, Lu J et al., J. Clin. Invest. (2018) and R/Bioconductor package BloodCancerMultiOmics2017.

Author: Malgorzata Oles, Andreas Mock

Maintainer: Malgorzata Oles <dr.malgorzata.oles at>, Andreas Mock <andreas.mock at>

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biocViews CancerData, DiseaseModel, ExperimentData, LeukemiaCancerData
Version 1.18.0
License LGPL
Depends R (>= 3.5.0)
Imports SummarizedExperiment, ExperimentHub
Suggests BiocStyle, ggplot2, knitr, rmarkdown
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