Available Modules

data (data.R)

Sample data sets of varying types. These include:

• a collection of gene sets, as used in the Lamb 2006 CMap paper
• An example metadata table, as one might find in a .gct or .gctx file
• An example GCT object, with row and column metadata and a matrix of expression values.

Maintainer: Ted Natoli, tnatoli@broadinstitute.org

io (io.R)

A collection of GCT class and methods definitions.

Maintainer: Ted Natoli, tnatoli@broadinstitute.org

utils (utils.R)

A collection of utility methods for GCT class objects.

Maintainer: Ted Natoli, tnatoli@broadinstitute.org