webbioc

DOI: 10.18129/B9.bioc.webbioc  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see webbioc.

Bioconductor Web Interface

Bioconductor version: 3.16

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Author: Colin A. Smith <colin at colinsmith.org>

Maintainer: Colin A. Smith <colin at colinsmith.org>

Citation (from within R, enter citation("webbioc")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("webbioc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("webbioc")

 

PDF webbioc Demo Script
PDF webbioc Overview
PDF   Reference Manual

Details

biocViews DifferentialExpression, Infrastructure, Microarray, OneChannel, Software
Version 1.70.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 18 years)
License GPL (>= 2)
Depends R (>= 1.8.0), Biobase, affy, multtest, annaffy, vsn, gcrma, qvalue
Imports multtest, qvalue, stats, utils, BiocManager
LinkingTo
Suggests
SystemRequirements Unix, Perl (>= 5.6.0), Netpbm
Enhances
URL http://www.bioconductor.org/
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package webbioc_1.70.0.tar.gz
Windows Binary webbioc_1.70.0.zip
macOS Binary (x86_64) webbioc_1.70.0.tgz
macOS Binary (arm64) webbioc_1.70.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/webbioc
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/webbioc
Bioc Package Browser https://code.bioconductor.org/browse/webbioc/
Package Short Url https://bioconductor.org/packages/webbioc/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: