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RandomWalkRestartMH

DOI: 10.18129/B9.bioc.RandomWalkRestartMH  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see RandomWalkRestartMH.

Random walk with restart on multiplex and heterogeneous Networks

Bioconductor version: 3.16

This package performs Random Walk with Restart on multiplex and heterogeneous networks. It is described in the following article: "Random Walk With Restart On Multiplex And Heterogeneous Biological Networks" .

Author: Alberto Valdeolivas [cre, aut, ctb]

Maintainer: Alberto Valdeolivas <alvaldeolivas at gmail.com>

Citation (from within R, enter citation("RandomWalkRestartMH")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RandomWalkRestartMH")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RandomWalkRestartMH")

 

HTML R Script Random Walk with Restart on Multiplex and Heterogeneous Network
PDF   Reference Manual
Text   NEWS

Details

biocViews BioCarta, BiomedicalInformatics, GenePrediction, GraphAndNetwork, KEGG, MathematicalBiology, Network, NetworkInference, Pathways, Reactome, Software, SomaticMutation, SystemsBiology
Version 1.18.0
In Bioconductor since BioC 3.7 (R-3.5) (5 years)
License GPL (>= 2)
Depends R (>= 3.5.0)
Imports igraph, Matrix, dnet, methods
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL https://github.com/alberto-valdeolivas/RandomWalkRestartMH
BugReports https://github.com/alberto-valdeolivas/RandomWalkRestartMH/issues
Depends On Me
Imports Me netOmics
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RandomWalkRestartMH_1.18.0.tar.gz
Windows Binary RandomWalkRestartMH_1.18.0.zip (64-bit only)
macOS Binary (x86_64) RandomWalkRestartMH_1.18.0.tgz
macOS Binary (arm64) RandomWalkRestartMH_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RandomWalkRestartMH
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RandomWalkRestartMH
Bioc Package Browser https://code.bioconductor.org/browse/RandomWalkRestartMH/
Package Short Url https://bioconductor.org/packages/RandomWalkRestartMH/
Package Downloads Report Download Stats

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