CHANGES IN VERSION 1.1.2 + coverageOverRanges() can be allowed to produce NAs for uneven ranges in the output CHANGES IN VERSION 1.1.1 + coverageOverRanges() matches the order of input ranges and output matrix for options merge_all_replicates and merge_replicates_per_condition CHANGES IN VERSION 1.0.0 + Released to Bioconductor version 3.14 CHANGES IN VERSION 0.99.10 + coverageOverRanges() now supports mean and sum as combination method. Dpending on the returnOption, mean/ sum are computed over ranges or replicates. CHANGES IN VERSION 0.99.9 + BSFDataSet() and BSFDataSetFromBigWig() now check the path to the bigwig files in the meta data for potential duplicates + coverageOverRanges() now supports also ranges with different width, if returnOption = `merge_positions_keep_replicates` + Fix bug in makeBindingSites(); The minWidth parameter is now implemented as true lower boundary (>= instead of >). The default has changed from 2 to 3. + Fix description in makeBindingSites(); The minCrosslinks parameter describes the number of positions covered by crosslink events, instead of the total number of crosslinks. + Updated color scheme in rangeCoveragePlot(); and changed position of indicator box + Updated visual of reproducibiliyCutoffPlot() function CHANGES IN VERSION 0.99.8 + Updated coverageOverRange(), Function now does support different output formats, summarizing the coverage differently over range, replicates and condition CHANGES IN VERSION 0.99.1 - 0.99.7 + Fix bugs for Bioconductor submission CHANGES IN VERSION 0.99.0 (2021-05-15) + Submitted to Bioconductor