EBcoexpress

DOI: 10.18129/B9.bioc.EBcoexpress    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis

Bioconductor version: 3.15

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Citation (from within R, enter citation("EBcoexpress")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")

 

PDF R Script EBcoexpress Demo
PDF   Reference Manual

Details

biocViews Bayesian, Software
Version 1.40.0
In Bioconductor since BioC 2.10 (R-2.15) (10.5 years)
License GPL (>= 2)
Depends EBarrays, mclust, minqa
Imports
LinkingTo
Suggests graph, igraph, colorspace
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me dcanr
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EBcoexpress_1.40.0.tar.gz
Windows Binary EBcoexpress_1.40.0.zip (64-bit only)
macOS Binary (x86_64) EBcoexpress_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/EBcoexpress
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBcoexpress
Package Short Url https://bioconductor.org/packages/EBcoexpress/
Package Downloads Report Download Stats

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