Prediction of intronic splicing branchpoints


[Up] [Top]

Documentation for package ‘branchpointer’ version 1.22.0

Help Pages

gtfToExons Convert GTF file to exon location file
makeBranchpointWindowForExons Make branchpoint window regions
makeBranchpointWindowForSNP Makes a branchpointer formatted GRanges object from refsnp ids
plotBranchpointWindow Plots branchpointer predictions
predictBranchpoints Predict branchpoint probability scores
predictionsToSummary Convert SNP branchpoint predictions across the branchpoint window to an intronic summary
readQueryFile Read a query file