DOI: 10.18129/B9.bioc.Wrench    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see Wrench.

Wrench normalization for sparse count data

Bioconductor version: 3.14

Wrench is a package for normalization sparse genomic count data, like that arising from 16s metagenomic surveys.

Author: Senthil Kumar Muthiah [aut], Hector Corrada Bravo [aut, cre]

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("Wrench")):


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biocViews Normalization, Sequencing, Software
Version 1.12.0
In Bioconductor since BioC 3.8 (R-3.5) (3.5 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports limma, matrixStats, locfit, stats, graphics
Suggests knitr, rmarkdown, metagenomeSeq, DESeq2, edgeR
URL https://github.com/HCBravoLab/Wrench
BugReports https://github.com/HCBravoLab/Wrench/issues
Depends On Me
Imports Me metagenomeSeq
Suggests Me PLNmodels
Links To Me
Build Report  

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Source Package Wrench_1.12.0.tar.gz
Windows Binary Wrench_1.12.0.zip
macOS 10.13 (High Sierra) Wrench_1.12.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Wrench
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Wrench
Package Short Url https://bioconductor.org/packages/Wrench/
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