DOI: 10.18129/B9.bioc.KEGGprofile    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see KEGGprofile.

An annotation and visualization package for multi-types and multi-groups expression data in KEGG pathway

Bioconductor version: 3.14

KEGGprofile is an annotation and visualization tool which integrated the expression profiles and the function annotation in KEGG pathway maps. The multi-types and multi-groups expression data can be visualized in one pathway map. KEGGprofile facilitated more detailed analysis about the specific function changes inner pathway or temporal correlations in different genes and samples.

Author: Shilin Zhao, Yan Guo, Yu Shyr

Maintainer: Shilin Zhao <shilin.zhao at>

Citation (from within R, enter citation("KEGGprofile")):


To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))


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biocViews KEGG, Pathways, Software
Version 1.36.0
In Bioconductor since BioC 2.11 (R-2.15) (9.5 years)
License GPL (>= 2)
Imports AnnotationDbi, png, TeachingDemos, XML, KEGG.db, KEGGREST, biomaRt, RCurl, ggplot2, reshape2
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