GeneAnswers

DOI: 10.18129/B9.bioc.GeneAnswers    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GeneAnswers.

Integrated Interpretation of Genes

Bioconductor version: 3.14

GeneAnswers provides an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.

Author: Lei Huang, Gang Feng, Pan Du, Tian Xia, Xishu Wang, Jing, Wen, Warren Kibbe and Simon Lin

Maintainer: Lei Huang <lhuang1998 at gmail.com> and Gang Feng <gilbert.feng at qq.com>

Citation (from within R, enter citation("GeneAnswers")):

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GeneAnswers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneAnswers")

 

PDF GeneAnswers
PDF R Script GeneAnswers web-based visualization module
PDF   Reference Manual
Text   NEWS

Details

biocViews DataRepresentation, GraphsAndNetworks, Infrastructure, Software, Visualization
Version 2.36.0
In Bioconductor since BioC 2.5 (R-2.10) (12.5 years)
License LGPL (>= 2)
Depends R (>= 3.0.0), igraph, KEGGREST, RCurl, annotate, Biobase(>= 1.12.0), methods, XML, RSQLite, MASS, Heatplus, RColorBrewer
Imports RBGL, annotate, downloader
LinkingTo
Suggests GO.db, reactome.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db, graph
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me InterMineR
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GeneAnswers_2.36.0.tar.gz
Windows Binary GeneAnswers_2.36.0.zip
macOS 10.13 (High Sierra) GeneAnswers_2.36.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/GeneAnswers
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GeneAnswers
Package Short Url https://bioconductor.org/packages/GeneAnswers/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: