reactome.db

DOI: 10.18129/B9.bioc.reactome.db    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see reactome.db.

A set of annotation maps for reactome

Bioconductor version: 3.13

A set of annotation maps for reactome assembled using data from reactome

Author: Willem Ligtenberg

Maintainer: Willem Ligtenberg <willem at 42analytics.eu>

Citation (from within R, enter citation("reactome.db")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("reactome.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, FunctionalAnnotation
Version 1.76.0
License CC BY 4.0
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.33.0)
Imports methods, AnnotationDbi
LinkingTo
Suggests RSQLite
SystemRequirements
Enhances
URL
Depends On Me
Imports Me attract, bioCancer, famat, mAPKL, methylGSA, NoRCE, ReactomePA, scTensor, signatureSearch, SMITE
Suggests Me AnnotationDbi, BioCor, ChIPpeakAnno, FGNet, fgsea, GeneAnswers, MLP, PCAN, PhosR, safe, simplifyEnrichment
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package reactome.db_1.76.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url https://bioconductor.org/packages/reactome.db/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: