DOI: 10.18129/B9.bioc.yaqcaffy    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see yaqcaffy.

Affymetrix expression data quality control and reproducibility analysis

Bioconductor version: 3.13

Quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

Author: Laurent Gatto

Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>

Citation (from within R, enter citation("yaqcaffy")):


To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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biocViews Microarray, OneChannel, QualityControl, ReportWriting, Software
Version 1.52.0
In Bioconductor since BioC 2.2 (R-2.7) (13.5 years)
License Artistic-2.0
Depends simpleaffy (>= 2.19.3), methods
Imports stats4
Suggests MAQCsubsetAFX, affydata, xtable, tcltk2, tcltk
Depends On Me
Imports Me
Suggests Me
Links To Me
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