DOI: 10.18129/B9.bioc.MACSQuantifyR    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see MACSQuantifyR.

Fast treatment of MACSQuantify FACS data

Bioconductor version: 3.13

Automatically process the metadata of MACSQuantify FACS sorter. It runs multiple modules: i) imports of raw file and graphical selection of duplicates in well plate, ii) computes statistics on data and iii) can compute combination index.

Author: Raphaël Bonnet [aut, cre], Marielle Nebout [dtc],Giulia Biondani [dtc], Jean-François Peyron[aut,ths], Inserm [fnd]

Maintainer: Raphaël Bonnet <raphael.bonnet at>

Citation (from within R, enter citation("MACSQuantifyR")):


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HTML R Script MACSQuantifyR_quick_introduction
HTML R Script MACSQuantifyR_simple_pipeline
HTML R Script MACSQuantifyR_step_by_step_analysis
PDF   Reference Manual
Text   NEWS


biocViews DataImport, DataRepresentation, FlowCytometry, GUI, Normalization, Preprocessing, Software
Version 1.6.0
In Bioconductor since BioC 3.10 (R-3.6) (2 years)
License Artistic-2.0
Imports readxl, graphics, tools, utils, grDevices, ggplot2, ggrepel, methods, stats, latticeExtra, lattice, rmarkdown, png, grid, gridExtra, prettydoc, rvest, xml2
Suggests knitr, testthat, R.utils, spelling
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