DOI: 10.18129/B9.bioc.Imetagene    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Imetagene.

A graphical interface for the metagene package

Bioconductor version: 3.13

This package provide a graphical user interface to the metagene package. This will allow people with minimal R experience to easily complete metagene analysis.

Author: Audrey Lemacon <audrey.lemacon.1 at>, Charles Joly Beauparlant <charles.joly-beauparlant at>, Arnaud Droit <arnaud.droit at>

Maintainer: Audrey Lemacon <audrey.lemacon.1 at>

Citation (from within R, enter citation("Imetagene")):


To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews Alignment, ChIPSeq, Coverage, Genetics, MultipleComparison, Sequencing, Software
Version 1.22.0
In Bioconductor since BioC 3.2 (R-3.2) (6 years)
License Artistic-2.0 | file LICENSE
Depends R (>= 3.2.0), metagene, shiny
Imports d3heatmap, shinyBS, shinyFiles, shinythemes, ggplot2
Suggests knitr, BiocStyle, rmarkdown
Depends On Me
Imports Me
Suggests Me
Links To Me
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