writeFasta {sangeranalyseR} | R Documentation |
A method which writes FASTA files of the SangerRead, SangerContig, and SangerAlignment instance.
writeFasta(object, outputDir = NULL, compress = FALSE, compression_level = NA, selection = "all")
object |
A SangerRead, SangerContig, or SangerAlignment S4 instance. |
outputDir |
The output directory of generated FASTA files. |
compress |
Like for the |
compression_level |
This parameter will be passed to |
selection |
This parameter will be passed to |
A SangerRead
, SangerContig
, or SangerAlignment
object.
Kuan-Hao Chao
data(sangerReadFData) data(sangerContigData) data(sangerAlignmentData) ## Not run: writeFasta(sangerReadFData) writeFasta(sangerContigData) writeFasta(sangerAlignmentData) ## End(Not run)