generateReport {sangeranalyseR} | R Documentation |
A method which generates final reports of the SangerRead, SangerContig, and SangerAlignment instance.
generateReport(object, outputDir = NULL, includeSangerContig = TRUE, includeSangerRead = TRUE, ...)
object |
A SangerRead, SangerContig, or SangerAlignment S4 instance. |
outputDir |
The output directory of the generated HTML report. |
includeSangerContig |
The parameter that decides whether to include SangerContig level report. The value is |
includeSangerRead |
The parameter that decides whether to include SangerRead level report. The value is |
... |
Further generateReportSR, generateReportSC, and generateReportSA related parameters. |
A SangerRead
, SangerContig
, or SangerAlignment
object.
Kuan-Hao Chao
data(sangerReadFData) data(sangerContigData) data(sangerAlignmentData) ## Not run: generateReport(sangerReadFData) generateReport(sangerContigData) generateReport(sangerAlignmentData) ## End(Not run)