Brings SingleCellExperiment to the Tidyverse

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Documentation for package ‘tidySingleCellExperiment’ version 1.2.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

add_count	Count observations by group
add_count.default	Count observations by group
add_count.SingleCellExperiment	Count observations by group
as_tibble	Coerce lists, matrices, and more to data frames
bind	Efficiently bind multiple data frames by row and column
cell_type_df	Cell types of 80 PBMC single cells
count	Count observations by group
extract	unnest
ggplot	Create a new ggplot from a tidySingleCellExperiment object
glimpse	Coerce lists, matrices, and more to data frames
join_features	Add differential featureion information to a tbl using edgeR.
join_transcripts	(DEPRECATED) Extract and join information for transcripts.
nest	unnest
pbmc_small	pbmc_small
pbmc_small_nested_interactions	Intercellular ligand-receptor interactions for 38 ligands from a single cell RNA-seq cluster.
pivot_longer	Pivot data from wide to long
plot_ly	Initiate a plotly visualization
print	Printing tibbles
print.SingleCellExperiment	Printing tibbles
separate	Unite multiple columns into one by pasting strings together
tidy	tidy for SingleCellExperiment
unite	Unite multiple columns into one by pasting strings together
unnest	unnest