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| availableCategories | Available ontology categories |
| availableCategories-method | Available ontology categories |
| availableOntologies | All available ontology names |
| availableOntologies-method | All available ontology names |
| getEnrichmentTables | Get enrichment tables from GREAT web server |
| getEnrichmentTables-method | Get enrichment tables from GREAT web server |
| GreatJob | Constructor method for GreatJob class |
| GreatJob-class | Class to store and retrieve GREAT results |
| plotRegionGeneAssociationGraphs | Plot region-gene association figures |
| plotRegionGeneAssociationGraphs-method | Plot region-gene association figures |
| submitGreatJob | Send requests to GREAT web server |