Easy single cell analysis platform for enrichment


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Documentation for package ‘escape’ version 1.2.0

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enrichIt Calculate gene set enrichment scores for single-cell data
getGeneSets Get a collection of gene sets to perform enrichment on
getSignificance Perform significance testing between groups and enrichement scores.
masterPCAPlot Visualize the components of the PCA analysis of the enrichment results
pcaEnrichment Density plot of the principal components
performPCA Calculate Principal Components for the Enrichment Scores
ridgeEnrichment Generate a ridge plot to examine enrichment distributions
splitEnrichment Generate a split violin plot examine enrichment distributions