Differential pattern analysis for Ribo-seq data

Documentation for package ‘RiboDiPA’ version 1.0.0

data.binned	An example of binned P-sites data
data.psite	An example of P-site coverage data
dataBinning	Data binning
diffPatternTest	Differential pattern analysis of Ribo-seq data
diffPatternTestExon	Main function for differential pattern analysis of exon-binned Ribo-seq data
normFactor	Size factors for normalization by sequencing depth
plotTest	Plotting ribosome footprint data from mapped P-sites at the bin level.
plotTrack	Plotting ribosome footprint data at the mapped P-site level
psiteCal	P-site position of reads
psiteMapping	P-site mapping
result.pst	An example of differential pattern analysis result
RiboDiPA	A wrapper function for the RiboDiPA pipeline