allSameID |
Set all datasets in the same ID |
batchRemove |
Elimination of covariates batch effect or bias |
calculateES |
Calculation of Effects Sizes and their variance |
createObjectMA |
Creation of the object to use in meta-analysis |
dataLog |
Auxiliary function to check if data are log transfromed and transformed if it are not log-transformed |
downloadGEOData |
Download datasets from GEO database |
elementObjectMA |
Creation of the object to use in meta-analysis |
heterogeneityTest |
It allows checking the heterogeneity of the different studies |
makeHeatmap |
Visualization of the meta-analysis results |
metaAnalysisDE |
Performing Meta-analysis |
pvalueIndAnalysis |
Calculation p-value for each gene and study |
seeCov |
Visualization the effect of covariates in data variability |