BEAT - BS-Seq Epimutation Analysis Toolkit

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Documentation for package ‘BEAT’ version 1.30.0

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BEAT-package BEAT - BS-Seq Epimutation Analysis Toolkit
BEAT BEAT - BS-Seq Epimutation Analysis Toolkit
epimutation_calls Returns epimutation rates and sites.
generate_results Computes model methylation states for genomic region counts of a list of samples.
makeParams Creates a parameter object of arguments to be used with other BEAT functions.
positions Sample dataset of CpG positions for a single cell BS-seq sample
positions.reference Sample dataset of CpG positions for a reference BS-Seq sample
positions_to_regions Converts methylation counts for single genomic positions to counts for genomic regions