Brings SingleCellExperiment to the Tidyverse


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Documentation for package ‘tidySingleCellExperiment’ version 1.0.0

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as_tibble Coerce lists, matrices, and more to data frames
bind Efficiently bind multiple data frames by row and column
cell_type_df Cell types of 80 PBMC single cells
count Count observations by group
extract unnest
ggplot Create a new ggplot from a tidySingleCellExperiment object
join_transcripts Add differential transcription information to a tbl using edgeR.
nest unnest
pbmc_small pbmc_small
pbmc_small_nested_interactions Intercellular ligand-receptor interactions for 38 ligands from a single cell RNA-seq cluster.
pivot_longer unnest
plot_ly Initiate a plotly visualization
print Printing tibbles
print.tidySingleCellExperiment Printing tibbles
separate unnest
tidy tidy for SingleCellExperiment
unite unnest
unnest unnest