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| rScudo-package | Signature-based Clustering for Diagnostic Purposes |
| consensusDownSignatures | Class ScudoResults |
| consensusDownSignatures-method | Class ScudoResults |
| consensusUpSignatures | Class ScudoResults |
| consensusUpSignatures-method | Class ScudoResults |
| distMatrix | Class ScudoResults |
| distMatrix-method | Class ScudoResults |
| downSignatures | Class ScudoResults |
| downSignatures-method | Class ScudoResults |
| groupsAnnotation | Class ScudoResults |
| groupsAnnotation-method | Class ScudoResults |
| scudoClassify | Performes classification using SCUDO |
| scudoCytoscape | Create a Cytoscape network from the output of scudoNetwork |
| scudoModel | Generate model for 'caret::train' |
| scudoNetwork | Create graph from a ScudoResults object |
| scudoNetwork-method | Create graph from a ScudoResults object |
| scudoParams | Class ScudoResults |
| scudoParams-method | Class ScudoResults |
| scudoPlot | Plot scudoNetwork result |
| ScudoResults | Class ScudoResults |
| ScudoResults-class | Class ScudoResults |
| scudoTest | Performs SCUDO analysis on test dataset |
| scudoTrain | Performs SCUDO analysis |
| selectedFeatures | Class ScudoResults |
| selectedFeatures-method | Class ScudoResults |
| show-method | Class ScudoResults |
| upSignatures | Class ScudoResults |
| upSignatures-method | Class ScudoResults |