## ----setup, include=FALSE----------------------------------------------------- knitr::opts_chunk$set(echo = TRUE) knitr::opts_knit$set(progress = FALSE) ## ----message=FALSE, warning=FALSE, eval=FALSE--------------------------------- # if (!requireNamespace("BiocManager", quietly=TRUE)) # install.packages("BiocManager") # BiocManager::install("TCGAbiolinks") ## ----message=FALSE, warning=FALSE, eval=FALSE--------------------------------- # if (!requireNamespace("BiocManager", quietly = TRUE)) # install.packages("BiocManager") # BiocManager::install("BioinformaticsFMRP/TCGAbiolinksGUI.data") # BiocManager::install("BioinformaticsFMRP/TCGAbiolinks") ## ----message=FALSE, warning=FALSE, include=TRUE------------------------------- library(TCGAbiolinks) library(dplyr) library(DT) ## ----------------------------------------------------------------------------- version packageVersion("TCGAbiolinks")