R/flowJoWorkspace_Methods.R
flowjo_workspace-class.Rd
Objects can be created by calls of the form new("flowjo_workspace.xml", ...)
.
version
:Object of class "character"
. The version of the XML workspace.
file
:Object of class "character"
. The file name.
.cache
:Object of class "environment"
. An environment for internal use.
path
:Object of class "character"
. The path to the file.
doc
:Object of class "XMLInternalDocument"
. The XML document object.
options
:Object of class "integer"
. The XML parsing options passed to xmlTreeParse
.
GatingSet
GatingHierarchy
require(flowWorkspaceData)#>d<-system.file("extdata",package="flowWorkspaceData") wsfile<-list.files(d,pattern="A2004Analysis.xml",full=TRUE) ws <- open_flowjo_xml(wsfile); ws#> File location: /usr/local/lib/R/cytoset/flowWorkspaceData/extdata/A2004Analysis.xml #> #> Groups in Workspace #> Name Num.Samples #> 1 All Samples 2#> sampleID name count pop.counts #> 1 1 a2004_O1T2pb05i_A1_A01.fcs 61832 19 #> 2 2 a2004_O1T2pb05i_A2_A02.fcs 45363 19