dualKS-package |
Dual KS Discriminant Analysis and Classification |
class:DKSClassifier |
Class to contain gene set signatures. |
class:DKSGeneScores |
Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
class:DKSGeneSet |
Class to contain gene signatures. |
class:DKSPredicted |
Class to contain classification results from dksClassify |
dks |
A demonstration data set for package dualKS. |
DKSClassifier |
Class to contain gene set signatures. |
DKSClassifier-class |
Class to contain gene set signatures. |
dksClassify |
Predict classes for gene expression sets. |
dksCustomClass |
Create a classification object from predefined gene signature. |
DKSGeneScores |
Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
DKSGeneScores-class |
Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
DKSGeneSet |
Class to contain gene signatures. |
DKSGeneSet-class |
Class to contain gene signatures. |
dksPerm |
Estimate significance of signature scores. |
DKSPredicted |
Class to contain classification results from dksClassify |
DKSPredicted-class |
Class to contain classification results from dksClassify |
dksSelectGenes |
Extract gene signatures from a DKSGeneScores object. |
dksTrain |
Perform Dual KS Discriminant Analysis |
dksWeights |
Calculate gene weights based on average expression. |
dualKS |
Dual KS Discriminant Analysis and Classification |
eset |
A demonstration data set for package dualKS. |
KS |
Calculate Kolmogorov Smirnov rank sum scores. |
plot-method |
Class to contain classification results from dksClassify |
pv.f |
A demonstration data set for package dualKS. |
pvr.f |
A demonstration data set for package dualKS. |
show-method |
Class to contain classification results from dksClassify |
summary-method |
Class to contain classification results from dksClassify |