assignCellType |
Align cell types when reference proportions are known |
csDeconv |
Improve reference-free deconvolution using cross-cell type differential analysis |
csTest |
Testing differential signals for specified phenotype and cell type(s). |
DEVarSelect |
Feature selection for reference-free deconvolution using cross-cell type differential analysis |
findRefinx |
findRefinx |
fitModel |
Fit model with proportions and phenotypes. |
makeDesign |
Generate design matrix from input phenotypes and proportions. |
RA_100samples |
An example dataset for cellular proportion estimation and multiple factor design |