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| ChangePointEstimator | A function to identify the time of a change in the mean or variability of a metric |
| CUSUMChart | A function to create cumulative sum charts for mean (CUSUMm) and cumulative sum charts for variability (CUSUMv) control charts |
| DataProcess | A data processing function |
| DecisionMap | A function to create heatmaps to compare performance with user defined performance criteria |
| MissingDataMap | A function to summarize missing values |
| MSnbaseToMSstatsQC | A function to convert MSnbase files to MSstatsQC format |
| QCloudDDA | DDA QC data from QCloud System |
| QCloudSRM | SRM QC data from QCloud System |
| QuiCDIA | DIA iRT data from QuiC System |
| RadarPlot | A function to create radar plot to aggregate results from X and mR charts or CUSUMm and CUSUMv charts. |
| RemoveMissing | A data processing function for removing missing values |
| RiverPlot | A function to create river plot to aggregate results from X and mR charts or CUSUMm and CUSUMv charts. |
| S9Site54 | CPTAC study 9.1 site 54 dataset |
| XmRChart | A function to construct individual (X) and moving range (mR) control charts |