Word cloud summaries of GO enrichment analysis


[Up] [Top]

Documentation for package ‘GOsummaries’ version 2.24.0

Help Pages

GOsummaries-package Word cloud summaries of GO enrichment analysis
add_expression.gosummaries Add expression data to gosummaries object
add_to_slot.gosummaries Functions for working with gosummaries object
customize Customization function for panel
GOsummaries Word cloud summaries of GO enrichment analysis
gosummaries Constructor for gosummaries object
gosummaries.default Constructor for gosummaries object
gosummaries.kmeans Prepare gosummaries object based on k-means results
gosummaries.MArrayLM Prepare gosummaries object based on limma results
gosummaries.matrix Prepare gosummaries object based on Multi Dimensional Scaling (MDS) results
gosummaries.prcomp Prepare gosummaries object based on PCA results
gs_kmeans Example gene expression dataset
gs_limma Example gene expression dataset
gs_limma_exp Example gene expression dataset
gs_pca Example gene expression dataset
is.gosummaries Functions for working with gosummaries object
metabolomic_example Example metabolomic dataset
metagenomic_example Example metagenomic dataset
panel_boxplot Panel drawing functions
panel_boxplot_classes Panel drawing functions
panel_violin Panel drawing functions
panel_violin_box Panel drawing functions
panel_violin_box_classes Panel drawing functions
panel_violin_classes Panel drawing functions
plot.gosummaries Plot the GOsummaries figure
plotWordcloud Plot a wordcloud given words and frequencies
print.gosummaries Functions for working with gosummaries object
tissue_example Example gene expression dataset
[.gosummaries Functions for working with gosummaries object