seq2pathway.data

DOI: 10.18129/B9.bioc.seq2pathway.data    

This is the development version of seq2pathway.data; to use it, please install the devel version of Bioconductor.

data set for R package seq2pathway

Bioconductor version: Development (3.10)

Supporting data for the seq2patheway package. Includes modified gene sets from MsigDB and org.Hs.eg.db; gene locus definitions from GENCODE project.

Author: Bin Wang <binw at uchicago.edu>

Maintainer: Xinan Holly Yang <xyang2 at uchicago.edu>

Citation (from within R, enter citation("seq2pathway.data")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("seq2pathway.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("seq2pathway.data")

 

PDF An R data package for sequence
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData
Version 1.17.0
License GPL (>= 2)
Depends R (>= 2.10.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me seq2pathway
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package seq2pathway.data_1.17.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/seq2pathway.data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/seq2pathway.data
Package Short Url http://bioconductor.org/packages/seq2pathway.data/
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