msqc1

DOI: 10.18129/B9.bioc.msqc1    

This is the development version of msqc1; to use it, please install the devel version of Bioconductor.

Sigma mix MSQC1 data

Bioconductor version: Development (3.10)

The data set contains an eight technical replicate data set and a three replicate dilution series of the MS Qual/Quant QC Mix standard sample (Sigma-Aldrich, Buchs, Switzerland) measured on five different mass spec platforms at the Functional Genomics Center Zurich.

Author: Tobias Kockmann [aut], Christian Trachsel [aut], Christian Panse [aut, cre]

Maintainer: Christian Panse <cp at fgcz.ethz.ch>

Citation (from within R, enter citation("msqc1")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("msqc1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msqc1")

 

PDF R Script ASMS 2016 poster (in portrait) abstract ID number: 282492
HTML R Script Introducing msqc1 - A Mass Spec Data set for Targeted Proteomics Performance Evaluation
HTML R Script LC Observations - Retention Time Stability
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, MassSpectrometryData, ReproducibleResearch
Version 1.13.0
License GPL
Depends R (>= 3.6), lattice, stats, utils
Imports
LinkingTo
Suggests BiocStyle, knitr, testthat, specL
SystemRequirements
Enhances
URL https://panoramaweb.org/labkey/MSQC1.url http://fgcz-bfabric.uzh.ch/bfabric/project.html?projectId=1959
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package msqc1_1.13.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/msqc1
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/msqc1
Package Short Url https://bioconductor.org/packages/msqc1/
Package Downloads Report Download Stats

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