## ----setup, include=FALSE----------------------------------------------------- knitr::opts_chunk$set(echo=TRUE) ## ---- eval=FALSE, include=TRUE------------------------------------------------ # library(devtools) # install_github("lindsayrutter/bigPint") ## ---- eval=FALSE, include=TRUE------------------------------------------------ # if (!require("BiocManager")) # install.packages("BiocManager") # BiocManager::install("bigPint") ## ---- eval=FALSE, include=TRUE------------------------------------------------ # library(bigPint) ## ---- eval=FALSE, include=TRUE------------------------------------------------ # help(package="bigPint") ## ---- eval=FALSE, include=TRUE------------------------------------------------ # help(plotLitre) ## ---- eval=FALSE, include=TRUE------------------------------------------------ # data(soybean_ir_sub) # soybean_ir_sub[,-1] <- log(soybean_ir_sub[,-1]+1) # data(soybean_ir_sub_metrics) # geneList = soybean_ir_sub_metrics[["N_P"]][1:5,]$ID # ret <- plotLitre(data = soybean_ir_sub, geneList = geneList, saveFile = FALSE) # names(ret) # ret[["N_P_Glyma.19G168700.Wm82.a2.v1"]] ## ---- eval=TRUE, include=TRUE------------------------------------------------- sessionInfo()