************************************************** * 3.39 SERIES NEWS * ************************************************** o Fix a bug in warpSet when target= is specified, we don't warp the target. Ensures intensities of target don't change. https://www.github.com/RGLab/flowStats/issues/22 ************************************************** * 3.35 SERIES NEWS * ************************************************** o An updated NEWS file! o Added Overton-like subtraction using densities, in the function overton_like(). ************************************************** * 1.7 SERIES PATCHED NEWS * ************************************************** NEW UTILITIES o Added an argument 'plot' to lymphGate() to produce plots of results. o Added an argument 'bwFac' to warpSet() to allow finer control to the smoothing of the density kernal estimation (in curv1Filter). This bandwidth factor would affect the number of landmarks. o Added two arguments 'refLine1' and refLine2' to quandrantGate() allowing algorithm to ignore minor, yet significant, sub-populations below 'refLine1' and 'refLine' when calculating the separator between positive and negative.