DOI: 10.18129/B9.bioc.waveTiling    

This is the development version of waveTiling; to use it, please install the devel version of Bioconductor.

Wavelet-Based Models for Tiling Array Transcriptome Analysis

Bioconductor version: Development (3.10)

This package is designed to conduct transcriptome analysis for tiling arrays based on fast wavelet-based functional models.

Author: Kristof De Beuf <kristof.debeuf at UGent.be>, Peter Pipelers <peter.pipelers at ugent.be> and Lieven Clement <lieven.clement at gmail.com>

Maintainer: Kristof De Beuf <kristof.debeuf at UGent.be>

Citation (from within R, enter citation("waveTiling")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script The waveTiling package
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, GeneExpression, Microarray, Software, TimeCourse
Version 1.27.0
In Bioconductor since BioC 2.11 (R-2.15) (7 years)
License GPL (>=2)
Depends oligo, oligoClasses, Biobase, Biostrings, GenomeGraphs
Imports methods, affy, preprocessCore, GenomicRanges, waveslim, IRanges
Suggests BSgenome, BSgenome.Athaliana.TAIR.TAIR9, waveTilingData, pd.atdschip.tiling, TxDb.Athaliana.BioMart.plantsmart22
URL https://r-forge.r-project.org/projects/wavetiling/
Depends On Me
Imports Me
Suggests Me
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Follow Installation instructions to use this package in your R session.

Source Package waveTiling_1.27.0.tar.gz
Windows Binary waveTiling_1.27.0.zip
Mac OS X 10.11 (El Capitan) waveTiling_1.27.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/waveTiling
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/waveTiling
Package Short Url https://bioconductor.org/packages/waveTiling/
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