geneClassifiers

DOI: 10.18129/B9.bioc.geneClassifiers    

This is the development version of geneClassifiers; to use it, please install the devel version of Bioconductor.

Application of gene classifiers

Bioconductor version: Development (3.10)

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper [cre, aut]

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Citation (from within R, enter citation("geneClassifiers")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")

 

PDF geneClassifiers and missing probesets
PDF R Script geneClassifiers introduction
PDF   Reference Manual
Text   NEWS

Details

biocViews BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version 1.9.1
In Bioconductor since BioC 3.5 (R-3.4) (2.5 years)
License GPL-2
Depends R (>= 3.6.0)
Imports utils, methods, stats, Biobase, BiocGenerics
LinkingTo
Suggests testthat
SystemRequirements
Enhances
URL https://doi.org/doi:10.18129/B9.bioc.geneClassifiers
BugReports https://github.com/rkuiper/geneClassifiers/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneClassifiers_1.9.1.tar.gz
Windows Binary geneClassifiers_1.9.1.zip
Mac OS X 10.11 (El Capitan) geneClassifiers_1.9.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report Download Stats

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