DOI: 10.18129/B9.bioc.gQTLstats    

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see gQTLstats.

gQTLstats: computationally efficient analysis for eQTL and allied studies

Bioconductor version: 3.10

computationally efficient analysis of eQTL, mQTL, dsQTL, etc.

Author: VJ Carey <stvjc at>

Maintainer: VJ Carey <stvjc at>

Citation (from within R, enter citation("gQTLstats")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


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HTML R Script gQTLstats: statistics for genetics of genomic features
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biocViews Software
Version 1.18.0
In Bioconductor since BioC 3.1 (R-3.2) (5 years)
License Artistic-2.0
Depends R (>= 3.5.0), Homo.sapiens
Imports methods, snpStats, BiocGenerics, S4Vectors(>= 0.9.25), IRanges, GenomeInfoDb, GenomicFiles, GenomicRanges, SummarizedExperiment, VariantAnnotation, Biobase, BatchJobs, gQTLBase, limma, mgcv, dplyr, AnnotationDbi, GenomicFeatures, ggplot2, reshape2, doParallel, foreach, ffbase, BBmisc, beeswarm, HardyWeinberg, graphics, stats, utils, shiny, plotly, erma, ggbeeswarm
Suggests geuvPack, geuvStore2, Rsamtools, knitr, rmarkdown, ggbio, BiocStyle, RUnit, multtest, gwascat,, TxDb.Hsapiens.UCSC.hg19.knownGene, ldblock
Depends On Me
Imports Me
Suggests Me gwascat, parglms, yriMulti
Links To Me
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Source Package gQTLstats_1.18.0.tar.gz
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