MOSim

DOI: 10.18129/B9.bioc.MOSim    

This is the development version of MOSim; to use it, please install the devel version of Bioconductor.

Multi-Omics Simulation (MOSim)

Bioconductor version: Development (3.10)

MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.

Author: Carlos Martínez [cre, aut], Sonia Tarazona [aut]

Maintainer: Carlos Martínez <cmarmir at gmail.com>

Citation (from within R, enter citation("MOSim")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MOSim")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MOSim")

 

PDF R Script MOSim
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentalDesign, RNASeq, Software, TimeCourse
Version 0.99.6
In Bioconductor since BioC 3.10 (R-3.6)
License GPL-3
Depends R (>= 3.6)
Imports HiddenMarkov, zoo, methods, matrixStats, dplyr, stringi, lazyeval, rlang, stats, utils, purrr, scales, stringr, tibble, tidyr, ggplot2, Biobase, IRanges, S4Vectors
LinkingTo
Suggests testthat, knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL https://github.com/Neurergus/MOSim
BugReports https://github.com/Neurergus/MOSim/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MOSim_0.99.6.tar.gz
Windows Binary MOSim_0.99.6.zip
Mac OS X 10.11 (El Capitan) MOSim_0.99.6.tgz
Source Repository git clone https://git.bioconductor.org/packages/MOSim
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MOSim
Package Short Url https://bioconductor.org/packages/MOSim/
Package Downloads Report Download Stats

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