GEWIST

DOI: 10.18129/B9.bioc.GEWIST    

This is the development version of GEWIST; to use it, please install the devel version of Bioconductor.

Gene Environment Wide Interaction Search Threshold

Bioconductor version: Development (3.10)

This 'GEWIST' package provides statistical tools to efficiently optimize SNP prioritization for gene-gene and gene-environment interactions.

Author: Wei Q. Deng, Guillaume Pare

Maintainer: Wei Q. Deng <dengwq at mcmaster.ca>

Citation (from within R, enter citation("GEWIST")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GEWIST")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GEWIST")

 

PDF R Script GEWIST.pdf
PDF   Reference Manual

Details

biocViews Genetics, MultipleComparison, Software
Version 1.29.0
In Bioconductor since BioC 2.10 (R-2.15) (7.5 years)
License GPL-2
Depends R (>= 2.10), car
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GEWIST_1.29.0.tar.gz
Windows Binary GEWIST_1.29.0.zip
Mac OS X 10.11 (El Capitan) GEWIST_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/GEWIST
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GEWIST
Package Short Url https://bioconductor.org/packages/GEWIST/
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