reduceProfile {PhyloProfile}R Documentation

Reduce the full processed profile data into supertaxon level

Description

Reduce data of the processed phylogenetic profiles from input taxonomy rank into supertaxon level (e.g. from species to phylum)

Usage

reduceProfile(fullProfile)

Arguments

fullProfile

dataframe contains the full processed profiles (see ?parseInfoProfile and ?fullProcessedProfile)

Value

A reduced dataframe contains only profile data for the selected supertaxon rank. This dataframe contains only supertaxa and their value (

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

See Also

parseInfoProfile for creating a full processed profile dataframe, fullProcessedProfile for a demo full processed profile dataframe

Examples

data("fullProcessedProfile", package="PhyloProfile")
reduceProfile(fullProcessedProfile)

[Package PhyloProfile version 1.0.7 Index]