To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

In most cases, you don't need to download the package archive at all.

Rtreemix

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 3.1

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")

 

PDF R Script Rtreemix
PDF   Reference Manual

Details

biocViews Software, StatisticalMethod
Version 1.30.0
In Bioconductor since BioC 2.2 (R-2.7) (7.5 years)
License LGPL
Depends R (>= 2.5.0)
Imports methods, graph, Biobase, Hmisc
LinkingTo
Suggests Rgraphviz
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Rtreemix_1.30.0.tar.gz
Windows Binary Rtreemix_1.30.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) Rtreemix_1.30.0.tgz
Mac OS X 10.9 (Mavericks) Rtreemix_1.30.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Rtreemix/tree/release-3.1
Package Short Url http://bioconductor.org/packages/Rtreemix/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center