To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGandMetacoreDzPathwaysGEO")

In most cases, you don't need to download the package archive at all.

KEGGandMetacoreDzPathwaysGEO

Disease Datasets from GEO

Bioconductor version: 3.0

This is a collection of 18 data sets for which the phenotype is a disease with a corresponding pathway in either KEGG or metacore database.This collection of datasets were used as gold standard in comparing gene set analysis methods.

Author: Gaurav Bhatti

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Citation (from within R, enter citation("KEGGandMetacoreDzPathwaysGEO")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGandMetacoreDzPathwaysGEO")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KEGGandMetacoreDzPathwaysGEO")

PDF		KEGGandMetacoreDzPathwaysGEO Vignette
PDF		Reference Manual

Details

biocViews	ExperimentData
Version	1.0.0
License	GPL-2
Depends	R (>= 2.15.0)
Imports	Biobase, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	KEGGandMetacoreDzPathwaysGEO_1.0.0.tar.gz
Windows Binary	KEGGandMetacoreDzPathwaysGEO_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	KEGGandMetacoreDzPathwaysGEO_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	KEGGandMetacoreDzPathwaysGEO_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center