To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mQTL.NMR")

In most cases, you don't need to download the package archive at all.

mQTL.NMR

Metabolomic Quantitative Trait Locus Mapping for 1H NMR data

Bioconductor version: 3.0

mQTL.NMR provides a complete mQTL analysis pipeline for 1H NMR data. Distinctive features include normalisation using most-used approaches, peak alignment using RSPA approach, dimensionality reduction using SRV and binning approaches, and mQTL analysis for animal and human cohorts.

Author: Lyamine Hedjazi and Jean-Baptiste Cazier

Maintainer: Lyamine Hedjazi <mqtl at ican-institute.org>

Citation (from within R, enter citation("mQTL.NMR")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mQTL.NMR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mQTL.NMR")

PDF	R Script	How to use the mQTL.NMR package
PDF		Reference Manual

Details

biocViews	Cheminformatics, Software
Version	1.0.0
In Bioconductor since	BioC 3.0 (R-3.1)
License	Artistic-2.0
Depends	R (>= 2.15.0)
Imports	qtl, GenABEL, MASS, outliers, graphics, stats, utils
LinkingTo
Suggests	BiocStyle
SystemRequirements
Enhances
URL	http://www.ican-institute.org/tools/
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	mQTL.NMR_1.0.0.tar.gz
Windows Binary	mQTL.NMR_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	mQTL.NMR_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	mQTL.NMR_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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