To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MSGFplus")

In most cases, you don't need to download the package archive at all.

MSGFplus

An interface between R and MS-GF+

Bioconductor version: 3.0

This package contains function to perform peptide identification using MS-GF+

Author: Thomas Lin Pedersen

Maintainer: Thomas Lin Pedersen <thomasp85 at gmail.com>

Citation (from within R, enter citation("MSGFplus")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MSGFplus")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSGFplus")

biocViews	MassSpectrometry, Proteomics, Software
Version	1.0.5
In Bioconductor since	BioC 3.0 (R-3.1)
License	GPL (>= 2)
Depends	methods
Imports	mzID
LinkingTo
Suggests	gWidgets, knitr, testthat
SystemRequirements	Java (>= 1.7)
Enhances
URL
Depends On Me
Imports Me	MSGFgui
Suggests Me	RforProteomics
Build Report

Follow Installation instructions to use this package in your R session.

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