Merge Maid


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Documentation for package ‘MergeMaid’ version 2.38.0

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AverageDuplicates Merge gene expression data sets
check Merge gene expression data sets
check.length Class mergeCoeff, a class for storing regression coefficients.
coeff Class mergeCoeff, a class for storing regression coefficients.
coeff-method Class mergeCoeff, a class for storing regression coefficients.
coeff<- Class mergeCoeff, a class for storing regression coefficients.
coeff<--method Class mergeCoeff, a class for storing regression coefficients.
exprs-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
exprs<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames<- Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy<- Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
hist Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
hist-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
intCor Correlation of Correlations
intCor-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
intcorDens plot of density functions of integrative correlations
intcorDens-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
integrative.cors Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
integrative.cors-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
intersection ExpressionSet with all common genes in a mergeExpressionSet
intersection-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
isna Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
length-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
maxcors Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
maxcors-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
maxintcor Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeCoeff Class mergeCoeff, a class for storing regression coefficients.
mergeCoeff-class Class mergeCoeff, a class for storing regression coefficients.
mergeCor Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
mergeCor-class Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
mergeData MergeMaid instance data for merging
mergeExpressionSet Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeExpressionSet-class Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeExprs Merge gene expression data sets
mergeget Merge gene expression data sets
modelOutcome Compare regression coefficients across studies
modelOutcome-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
names-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
names<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
notes-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
notes-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
notes<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
pairwise.cors Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
pairwise.cors-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
phenoData-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
phenoData<--method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
plot Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
plot-method Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
plot-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
sample1 MergeMaid instance data for merging
sample2 MergeMaid instance data for merging
sample3 MergeMaid instance data for merging
show-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
stdcoeff Class mergeCoeff, a class for storing regression coefficients.
stdcoeff-method Class mergeCoeff, a class for storing regression coefficients.
stdcoeff<- Class mergeCoeff, a class for storing regression coefficients.
stdcoeff<--method Class mergeCoeff, a class for storing regression coefficients.
subsetmES Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
summary-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
zscore Class mergeCoeff, a class for storing regression coefficients.
zscore-method Class mergeCoeff, a class for storing regression coefficients.
zscore<- Class mergeCoeff, a class for storing regression coefficients.
zscore<--method Class mergeCoeff, a class for storing regression coefficients.
[-method Class mergeExpressionSet, a class for merged microarray data, and methods for processing them