BeadArrayUseCases

Analysing Illumina BeadArray expression data using Bioconductor

Bioconductor version: 2.9

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <Mike.L.Smith at cancer.org.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BeadArrayUseCases")

To cite this package in a publication, start R and enter:

    citation("BeadArrayUseCases")

Documentation

PDF R Script BeadArrayUseCases.pdf
PDF BeadChipSimple_old.pdf
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray
Depends
Imports beadarray(>= 2.3.18), limma, GEOquery
Suggests Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
System Requirements
License GPL-2
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.4

Package Downloads

Package Source BeadArrayUseCases_1.0.4.tar.gz
Windows Binary BeadArrayUseCases_1.0.4.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary BeadArrayUseCases_1.0.4.tgz
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