nucleR

Nucleosome positioning package for R

Bioconductor version: 2.9

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("nucleR")

To cite this package in a publication, start R and enter:

    citation("nucleR")

Documentation

PDF R Script Quick analysis of nucleosome positioning experiments
PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPseq, Microarray, Sequencing, Genetics, HighThroughputSequencing
Depends methods, IRanges, ShortRead, Biobase
Imports Biobase, GenomicRanges, graphics, IRanges, methods, ShortRead, stats
Suggests
System Requirements
License LGPL (>= 3)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source nucleR_1.0.0.tar.gz
Windows Binary nucleR_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary nucleR_1.0.0.tgz
Package Downloads Report Download Stats

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Fred Hutchinson Cancer Research Center