TSSi-package | Transcription Start Site Identification |
annotation | Get methods |
annotation-method | Get methods |
annotation-TSSi | Get methods |
asRangedData | Convert to 'RangedData' |
asRangedData-methods | Convert to 'RangedData' |
asRangedData-TSSi | Convert to 'RangedData' |
assessGradPoisson | Normalize methods |
assessPoisson | Normalize methods |
counts | Get methods |
counts-method | Get methods |
counts-TSSi | Get methods |
delta | Get methods |
delta-method | Get methods |
delta-TSSi | Get methods |
end-method | Get methods |
end-TSSi | Get methods |
expect | Get methods |
expect-method | Get methods |
expect-TSSi | Get methods |
fit | Get methods |
fit-method | Get methods |
fit-TSSi | Get methods |
get-methods | Get methods |
get-TSSi | Get methods |
idenfify-methods | Identify methods |
identify | Identify methods |
identify-method | Identify methods |
identify-TSSi | Identify methods |
identifyStartSites | Identify methods |
identifyStartSites-method | Identify methods |
identifyStartSites-TSSi | Identify methods |
names-method | Get methods |
names-TSSi | Get methods |
normalize | Normalize methods |
normalize-method | Normalize methods |
normalize-TSSi | Normalize methods |
normalizeCounts | Normalize methods |
normalizeCounts-method | Normalize methods |
normalizeCounts-methods | Normalize methods |
normalizeCounts-TSSi | Normalize methods |
parameters | Get methods |
parameters-method | Get methods |
parameters-TSSi | Get methods |
physcoCounts | CAP capture data |
physcoCounts-data | CAP capture data |
physcoCounts-TSSi | CAP capture data |
plot | Plot methods |
plot-method | Plot methods |
plot-methods | Plot methods |
plot-TSSi | Plot methods |
ratio | Get methods |
ratio-method | Get methods |
ratio-TSSi | Get methods |
readData | CAP capture data |
readData-data | CAP capture data |
readData-TSSi | CAP capture data |
reads | Get methods |
reads-method | Get methods |
reads-TSSi | Get methods |
readsAsRangedData | Convert to 'RangedData' |
readsAsRangedData-method | Convert to 'RangedData' |
readsAsRangedData-TSSi | Convert to 'RangedData' |
segmentize | Segmentize methods |
segmentize-method | Segmentize methods |
segmentize-methods | Segmentize methods |
segmentize-TSSi | Segmentize methods |
segmentizeCounts | Segmentize methods |
segmentizeCounts-method | Segmentize methods |
segmentizeCounts-methods | Segmentize methods |
segmentizeCounts-TSSi | Segmentize methods |
segments | Get methods |
segments-method | Get methods |
segments-TSSi | Get methods |
segmentsAsRangedData | Convert to 'RangedData' |
segmentsAsRangedData-method | Convert to 'RangedData' |
segmentsAsRangedData-TSSi | Convert to 'RangedData' |
show-method | Class 'TssData' |
show-method | Class 'TssNorm' |
show-method | Class 'TssResult' |
show-TSSi | Class 'TssData' |
start-method | Get methods |
start-TSSi | Get methods |
subtract-functions | Subtract functions |
subtractExpectation | Subtract functions |
subtractExpectation-TSSi | Subtract functions |
tss | Get methods |
tss-method | Get methods |
tss-TSSi | Get methods |
tssAsRangedData | Convert to 'RangedData' |
tssAsRangedData-method | Convert to 'RangedData' |
tssAsRangedData-TSSi | Convert to 'RangedData' |
TssData | Class 'TssData' |
TssData-class | Class 'TssData' |
TssData-TSSi | Class 'TssData' |
TSSi | Transcription Start Site Identification |
TssNorm | Class 'TssNorm' |
TssNorm-class | Class 'TssNorm' |
TssNorm-TSSi | Class 'TssNorm' |
TssResult | Class 'TssResult' |
TssResult-class | Class 'TssResult' |
TssResult-TSSi | Class 'TssResult' |
[-method | Get methods |