The snp.matrix and X.snp.matrix classes

Bioconductor version: 2.8

Implements classes and methods for large-scale SNP association studies

Author: David Clayton <david.clayton at> and Hin-Tak Leung <htl10 at>

Maintainer: David Clayton <david.clayton at>

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To cite this package in a publication, start R and enter:



PDF R Script Imputation and meta-analysis
PDF R Script Principal components analysis
PDF Rill
PDF R Script snpMatrix introduction
PDF snpMatrix-paper-HumanHeridity2007.pdf
PDF snpStatsBug-vignette.pdf
PDF R Script TDT tests
PDF   Reference Manual


biocViews Microarray, SNP, GeneticVariability
Depends R(>= 2.3.0), survival, methods
Imports graphics, grDevices, methods, stats, survival, utils
Suggests hexbin
System Requirements
License GPL-3
Depends On Me
Imports Me
Suggests Me crlmm
Version 1.16.5
Since Bioconductor 2.2 (R-2.7)

Package Downloads

Package Source snpMatrix_1.16.5.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary snpMatrix_1.16.5.tgz
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