occugene

Functions for Multinomial Occupancy Distribution

Bioconductor version: 2.8

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("occugene")

To cite this package in a publication, start R and enter:

    citation("occugene")

Documentation

PDF R Script occugene
PDF   Reference Manual

Details

biocViews Bioinformatics, Annotation, Pathways
Depends R (>= 2.0.0)
Imports
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.12.0
Since Bioconductor 2.2 (R-2.7)

Package Downloads

Package Source occugene_1.12.0.tar.gz
Windows Binary occugene_1.12.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary occugene_1.12.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center