logitT

logit-t Package

Bioconductor version: 2.8

The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.

Author: Tobias Guennel <tguennel at vcu.edu>

Maintainer: Tobias Guennel <tguennel at vcu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("logitT")

To cite this package in a publication, start R and enter:

    citation("logitT")

Documentation

PDF R Script logitT primer
PDF   Reference Manual

Details

biocViews Microarray, DifferentialExpression
Depends affy
Imports
Suggests SpikeInSubset
System Requirements
License GPL (>= 2)
URL http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me
Version 1.10.0
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source logitT_1.10.0.tar.gz
Windows Binary logitT_1.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary logitT_1.10.0.tgz
Package Downloads Report Download Stats

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